2019
conda create -n qiime1 python=2.7 qiime matplotlib=1.4.3 mock nose -c bioconda
PackagesNotFoundError: The following packages are not available from current channels:
- qiime -> pynast==1.2.2 -> cogent[version='>=1.5.3'] -> mpi4py[version='>=1.0']
- qiime -> xorg-libxau
- qiime -> xorg-libxext
- qiime -> xorg-libsm
- qiime -> xorg-libxdmcp
- qiime -> xorg-libxrender
- qiime -> natsort[version='<4.0.0']
- qiime -> libpng[version='>=1.2.50,<1.3.0a0']
- matplotlib=1.4.3
# create manual a new conda environment "qiime1", install using pip
conda create -n qiime1 python=2.7 # create conda environment "qiime1"
conda activate qiime1 # open "qiime1" environment
pip install numpy # install numpy (python)
pip install qiime # install qiime-1 (python)
pip install h5py # install h5py (python) for reading .biom files
pip install matplotlib==1.4.3
print_qiime_config.py -t # test qiime-1 configuration
https://groups.google.com/forum/#!topic/qiime-forum/8NGPfPT6eAk