Analyzing exact amplicon sequence variants (ASVs) of 16S ribosomal sequences

DADA2

https://benjjneb.github.io/dada2/

Install

→ DADA2 install page

→ how to install DADA2 in a conda environment

Tutorials

→ DADA2 tutorial

→ R workflow using DADA2 and follow-up analysis in R (stats, alpha/beta, PCoA)

→ R workflow by the Computational Biology Core, Brown University

→ Run DADA2 in QIIME 2