Metagenomics
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Metagenomics
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16S tools
Assembly
BLAST
Bowtie2
Genome
Pathogen screening
Phylogenetic tree
SAMtools
Sequence data
Shotgun sequencing
Ubuntu/Linux server
Tools
>
Ubuntu/Linux server
Linux shell scripting.
Commands for working on an Ubuntu/Linux server.
Subpages
(16):
awk
bzip2
Extract columns from file
File properties
gzip & tar.gz
Loop over list of files
Rename multiple files
Replace string in file
rsync
Sed
shell stderr redirect
Show disk space usage
Sorting
split large file
Transpose table
word frequencies