Metagenomics
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Metagenomics
Wiki
Tools
Assembly
BLAST
Bowtie2
Genome annotation
Pathogen screening
Phylogenetic tree
QIIME
SAMtools
Sequence data
Short read samples
Ubuntu/Linux server
Tools
>
Short read samples
>
Alignment
Short read alignment
(full genome shotgun sequencing)
Tools
→ bowtie2
→ Burrows-Wheeler Aligner (BWA)
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