Tools‎ > ‎Bowtie2‎ > ‎

Install

How to install bowtie2 on Ubuntu/Linux?

download page
https://sourceforge.net/projects/bowtie-bio/files/bowtie2/


# create and go to install directory
cd $HOME/tools/bowtie2/

# download Ubuntu/Linux version
wget http://sourceforge.net/projects/bowtie-bio/files/bowtie2/2.3.0/bowtie2-2.3.0-linux-x86_64.zip/download

# decompress
unzip download

# add location to system PATH
export PATH=$HOME/tools/bowtie2/bowtie2-2.3.0:$PATH

# check installation
bowtie2 --help




Error missing library libtbb.so.2

bowtie2-2.3.0/bowtie2-align-s: error while loading shared libraries: libtbb.so.2: cannot open shared object file: No such file or directory
(ERR): Description of arguments failed!

Solutions

b) Install TBB library
    sudo apt-get update
    sudo apt-get install libtbb2   # or : apt-get install libtbb-dev