Error while running "multiple_join_paired_end.py"
Problem:multiple_join_paired_ends.py -i RawData -o JoinedReads Cannot find fastq-join. Is it installed? Is it in your path? sudo apt-get install ea-utils # download ea-utils from: https://expressionanalysis.github.io/ea-utils/ wget https://github.com/ExpressionAnalysis/ea-utils/zipball/master
unzip master # install required libraries sudo apt-get install libgsl0-dev # compile cd ExpressionAnalysis-ea-utils-*/clipper make # add path to your .bashrc file export PATH=$PATH:/path/to/my/ea-utils/ExpressionAnalysis-ea-utils-bd148d4/clipper |